|
|
"""
|
|
|
setup.py - Python package setup for Docking@HOME
|
|
|
|
|
|
Authors: OpenPeer AI, Riemann Computing Inc., Bleunomics, Andrew Magdy Kamal
|
|
|
"""
|
|
|
|
|
|
from setuptools import setup, find_packages, Extension
|
|
|
from setuptools.command.build_ext import build_ext
|
|
|
import sys
|
|
|
import os
|
|
|
|
|
|
|
|
|
with open("README.md", "r", encoding="utf-8") as fh:
|
|
|
long_description = fh.read()
|
|
|
|
|
|
|
|
|
with open("requirements.txt", "r", encoding="utf-8") as fh:
|
|
|
requirements = [line.strip() for line in fh if line.strip() and not line.startswith("#")]
|
|
|
|
|
|
class CMakeExtension(Extension):
|
|
|
def __init__(self, name, sourcedir=""):
|
|
|
Extension.__init__(self, name, sources=[])
|
|
|
self.sourcedir = os.path.abspath(sourcedir)
|
|
|
|
|
|
class CMakeBuild(build_ext):
|
|
|
def run(self):
|
|
|
for ext in self.extensions:
|
|
|
self.build_extension(ext)
|
|
|
|
|
|
def build_extension(self, ext):
|
|
|
|
|
|
pass
|
|
|
|
|
|
setup(
|
|
|
name="docking-at-home",
|
|
|
version="1.0.0",
|
|
|
author="OpenPeer AI, Riemann Computing Inc., Bleunomics, Andrew Magdy Kamal",
|
|
|
author_email="[email protected]",
|
|
|
description="Distributed and Parallel Molecular Docking Platform",
|
|
|
long_description=long_description,
|
|
|
long_description_content_type="text/markdown",
|
|
|
url="https://huggingface.co/OpenPeerAI/DockingAtHOME",
|
|
|
project_urls={
|
|
|
"Bug Reports": "https://huggingface.co/OpenPeerAI/DockingAtHOME/discussions",
|
|
|
"Documentation": "https://huggingface.co/OpenPeerAI/DockingAtHOME",
|
|
|
"Source": "https://huggingface.co/OpenPeerAI/DockingAtHOME",
|
|
|
"HuggingFace": "https://huggingface.co/OpenPeerAI/DockingAtHOME",
|
|
|
},
|
|
|
packages=find_packages(where="python"),
|
|
|
package_dir={"": "python"},
|
|
|
classifiers=[
|
|
|
"Development Status :: 4 - Beta",
|
|
|
"Intended Audience :: Science/Research",
|
|
|
"Topic :: Scientific/Engineering :: Chemistry",
|
|
|
"Topic :: Scientific/Engineering :: Bio-Informatics",
|
|
|
"License :: OSI Approved :: GNU General Public License v3 (GPLv3)",
|
|
|
"Programming Language :: Python :: 3",
|
|
|
"Programming Language :: Python :: 3.8",
|
|
|
"Programming Language :: Python :: 3.9",
|
|
|
"Programming Language :: Python :: 3.10",
|
|
|
"Programming Language :: Python :: 3.11",
|
|
|
"Operating System :: OS Independent",
|
|
|
],
|
|
|
python_requires=">=3.8",
|
|
|
install_requires=requirements,
|
|
|
extras_require={
|
|
|
"dev": [
|
|
|
"pytest>=7.4.0",
|
|
|
"pytest-cov>=4.1.0",
|
|
|
"black>=23.7.0",
|
|
|
"flake8>=6.1.0",
|
|
|
"mypy>=1.5.0",
|
|
|
"sphinx>=7.1.0",
|
|
|
],
|
|
|
"gpu": [
|
|
|
"cupy>=12.0.0",
|
|
|
],
|
|
|
},
|
|
|
entry_points={
|
|
|
"console_scripts": [
|
|
|
"docking-at-home=docking_at_home.cli:main",
|
|
|
],
|
|
|
},
|
|
|
include_package_data=True,
|
|
|
zip_safe=False,
|
|
|
)
|
|
|
|