### Godot version

v4.0.beta.custom_build [fab9926a9]

### System information

Fedora 37

### Issue description

When creating a new inherited scene, saving the scene (for example with Ctrl+S) defaults to overwriting the scene being inherited, instead of prompting for a location to save to.

### Steps to reproduce

1. Create a new inherited scene
2. Press Ctrl+S

If the scene being inherited is imported (for example from a glTF), an error displays. If the inherited scene is a .tscn or .scn, it gets overridden by an inherited scene that tries to inherit itself, which is impossible and thus corrupt.

### Minimal reproduction project

N/A
case SETTINGS_EDITOR_CONFIG_FOLDER: {
			OS::get_singleton()->shell_open(String("file:") + EditorPaths::get_singleton()->get_config_dir());
		} break;
		case SETTINGS_MANAGE_EXPORT_TEMPLATES: {
			export_template_manager->popup_manager();
		} break;
		case SETTINGS_MANAGE_FBX_IMPORTER: {
#if !defined(ANDROID_ENABLED) && !defined(WEB_ENABLED)
			fbx_importer_manager->show_dialog();
#endif
		} break;
		case SETTINGS_INSTALL_ANDROID_BUILD_TEMPLATE: {
			custom_build_manage_templates->hide();
			file_android_build_source->popup_centered_ratio();
		} break;
		case SETTINGS_MANAGE_FEATURE_PROFILES: {
			feature_profile_manager->popup_centered_clamped(Size2(900, 800) * EDSCALE, 0.8);
		} break;
		case SETTINGS_TOGGLE_FULLSCREEN: {
			DisplayServer::get_singleton()->window_set_mode(DisplayServer::get_singleton()->window_get_mode() == DisplayServer::WINDOW_MODE_FULLSCREEN ? DisplayServer::WINDOW_MODE_WINDOWED : DisplayServer::WINDOW_MODE_FULLSCREEN);
		} break;
		case EDITOR_SCREENSHOT: {
			screenshot_timer->start();
		} break;
		case SETTINGS_PICK_MAIN_SCENE: {
			file->set_file_mode(EditorFileDialog::FILE_MODE_OPEN_FILE);
			List<String> extensions;
			ResourceLoader::get_recognized_extensions_for_type("PackedScene", &extensions);
			file->clear_filters();
			for (int i = 0; i < extensions.size(); i++) {