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### Environment

* Dubbo version: 3.1.1
* Operating System version: xxx
* Java version: xxx

### Steps to reproduce this issue

1. xxx
2. xxx
3. xxx

Pls. provide [GitHub address] to reproduce this issue.

### Expected Behavior

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### Actual Behavior

![image](https://user-images.githubusercontent.com/9292748/209817200-def8712e-1992-4cc6-987c-d872d89a493c.png)

配置一个应用级配置，有三个接口，但是最后元数据刷新的却只有一个接口，另外两个接口的timeout 还是不变，重启后才变
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If there is an exception, please attach the exception trace:

```
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```

import org.apache.dubbo.rpc.cluster.ClusterInvoker;
import org.apache.dubbo.rpc.cluster.Configurator;
import org.apache.dubbo.rpc.cluster.Constants;
import org.apache.dubbo.rpc.cluster.governance.GovernanceRuleRepository;
import org.apache.dubbo.rpc.cluster.support.MergeableCluster;
import org.apache.dubbo.rpc.model.ApplicationModel;
import org.apache.dubbo.rpc.model.FrameworkModel;
import org.apache.dubbo.rpc.model.ModuleModel;
import org.apache.dubbo.rpc.model.ProviderModel;
import org.apache.dubbo.rpc.model.ScopeModel;
import org.apache.dubbo.rpc.model.ScopeModelAware;
import org.apache.dubbo.rpc.model.ScopeModelUtil;
import org.apache.dubbo.rpc.protocol.InvokerWrapper;
import org.apache.dubbo.rpc.support.ProtocolUtils;
import java.util.ArrayList;
import java.util.HashMap;
import java.util.List;
import java.util.Map;
import java.util.concurrent.ConcurrentHashMap;
import java.util.concurrent.ConcurrentMap;
import java.util.concurrent.ScheduledExecutorService;
import java.util.concurrent.TimeUnit;
import static org.apache.dubbo.common.constants.CommonConstants.APPLICATION_KEY;
import static org.apache.dubbo.common.constants.CommonConstants.CLUSTER_KEY;
import static org.apache.dubbo.common.constants.CommonConstants.COMMA_SPLIT_PATTERN;
import static org.apache.dubbo.common.constants.CommonConstants.CONSUMER;
import static org.apache.dubbo.common.constants.CommonConstants.DEFAULT_SERVER_SHUTDOWN_TIMEOUT;
import static org.apache.dubbo.common.constants.CommonConstants.DUBBO_VERSION_KEY;
import static org.apache.dubbo.common.constants.CommonConstants.ENABLED_KEY;
import static org.apache.dubbo.common.constants.CommonConstants.EXTRA_KEYS_KEY;