* [x] I have read the [Contributing Guidelines](https://github.com/electron/electron/blob/master/CONTRIBUTING.md) for this project.
* [x] I agree to follow the [Code of Conduct](https://github.com/electron/electron/blob/master/CODE_OF_CONDUCT.md) that this project adheres to.
* [x] I have searched the issue tracker for an issue that matches the one I want to file, without success.

### Issue Details

* **Electron Version:** 6.0.0-beta.13
* **Operating System:** Windows 10

### Expected Behavior

When calling `browserWindow.setAlwaysOnTop(true)`, I expect the `always-on-top-changed` event to be called with the boolean `isAlwaysOnTop` parameter set to `true`, and vice versa.

### Actual Behavior

I experience the opposite of above: When calling `browserWindow.setAlwaysOnTop(true)`, my `always-on-top-changed` handler is called with `false`, and vice versa.

### To Reproduce

I don't have any JS code to share and I'm not a JS dev (I use F# and compile to JS with Fable). I think the issue should be easy to reproduce though.
shell/browser/native_window_views.cc
return opacity_;
}
void NativeWindowViews::SetIgnoreMouseEvents(bool ignore, bool forward) {
#if defined(OS_WIN)
  LONG ex_style = ::GetWindowLong(GetAcceleratedWidget(), GWL_EXSTYLE);
  if (ignore)
    ex_style |= (WS_EX_TRANSPARENT | WS_EX_LAYERED);
  else
    ex_style &= ~(WS_EX_TRANSPARENT | WS_EX_LAYERED);
  if (layered_)
    ex_style |= WS_EX_LAYERED;
  ::SetWindowLong(GetAcceleratedWidget(), GWL_EXSTYLE, ex_style);
  
  if (!ignore) {
    SetForwardMouseMessages(false);
  } else {
    SetForwardMouseMessages(forward);
  }
#elif defined(USE_X11)
  if (ignore) {
    XRectangle r = {0, 0, 1, 1};
    XShapeCombineRectangles(gfx::GetXDisplay(), GetAcceleratedWidget(),
                            ShapeInput, 0, 0, &r, 1, ShapeSet, YXBanded);
  } else {
    XShapeCombineMask(gfx::GetXDisplay(), GetAcceleratedWidget(), ShapeInput, 0,
                      0, x11::None, ShapeSet);
  }
#endif
}
void NativeWindowViews::SetContentProtection(bool enable) {