* [x] I have read the [Contributing Guidelines](https://github.com/electron/electron/blob/master/CONTRIBUTING.md) for this project.
* [x] I agree to follow the [Code of Conduct](https://github.com/electron/electron/blob/master/CODE_OF_CONDUCT.md) that this project adheres to.
* [x] I have searched the issue tracker for an issue that matches the one I want to file, without success.

### Issue Details

* **Electron Version:** 6.0.0-beta.13
* **Operating System:** Windows 10

### Expected Behavior

When calling `browserWindow.setAlwaysOnTop(true)`, I expect the `always-on-top-changed` event to be called with the boolean `isAlwaysOnTop` parameter set to `true`, and vice versa.

### Actual Behavior

I experience the opposite of above: When calling `browserWindow.setAlwaysOnTop(true)`, my `always-on-top-changed` handler is called with `false`, and vice versa.

### To Reproduce

I don't have any JS code to share and I'm not a JS dev (I use F# and compile to JS with Fable). I think the issue should be easy to reproduce though.
shell/browser/native_window_views.cc
window_->NotifyWindowCloseButtonClicked();
    return false;
  }
 private:
  NativeWindowViews* window_;
  DISALLOW_COPY_AND_ASSIGN(NativeWindowClientView);
};
}  
NativeWindowViews::NativeWindowViews(const mate::Dictionary& options,
                                     NativeWindow* parent)
    : NativeWindow(options, parent),
      root_view_(new RootView(this)),
      keyboard_event_handler_(new views::UnhandledKeyboardEventHandler) {
  options.Get(options::kTitle, &title_);
  bool menu_bar_autohide;
  if (options.Get(options::kAutoHideMenuBar, &menu_bar_autohide))
    root_view_->SetAutoHideMenuBar(menu_bar_autohide);
#if defined(OS_WIN)
  
  
  options.Get(options::kResizable, &resizable_);
  options.Get(options::kMinimizable, &minimizable_);
  options.Get(options::kMaximizable, &maximizable_);
  
  options.Get("thickFrame", &thick_frame_);
  if (transparent())
    thick_frame_ = false;
#endif
  if (enable_larger_than_screen())