### Godot version

4.1.3

### System information

Linux

### Issue description

I'm trying to make an editor plugin on Rust:

```rust
#[derive(GodotClass)]
#[class(tool, editor_plugin, init, base=EditorPlugin)]
pub struct MyEditorPluginBase {}
```

But due to some limitations, I still have to use GDScript for some specific things.

So I tried to make a subclass of this Rust class:

```gdscript
@tool
class_name MyEditorPlugin
extends MyEditorPluginBase
```

This would work if `MyEditorPluginBase` was a GDScript class, but since it's a GDExtension class in my case, it doesn't work:

> Unable to load addon script from path: 'res://addons/my_addon/my_editor_plugin.gd' Base type is not EditorPlugin.

But it obviously **IS** EditorPlugin!

![godot-editorplugin-docs](https://github.com/godotengine/godot/assets/3236464/4665deeb-30f0-45cd-bfff-56101b9d4875)

![godot-editorplugin](https://github.com/godotengine/godot/assets/3236464/b1b6ecb4-de22-4abd-91a3-e180691f67ee)

If I understand correctly, this behavior is caused by this function, which checks some mysterious "instance base type" instead of real inheritance:

https://github.com/godotengine/godot/blob/fa4a65387ea41506ecc519fc61a06da110dce51c/editor/editor_node.cpp#L3456-L3458

https://github.com/godotengine/godot/blob/fa4a65387ea41506ecc519fc61a06da110dce51c/modules/gdscript/gdscript.cpp#L260-L263

Since the [documentation](https://docs.godotengine.org/en/stable/tutorials/plugins/editor/making_plugins.html#the-script-file) doesn't say that the script must be a **direct** subclass of EditorPlugin (and an indirect subclass works fine in GDScript), I interpret this behavior as a Godot bug.

### Steps to reproduce

See above

### Minimal reproduction project

[gdext_editor_plugin_test.zip](https://github.com/godotengine/godot/files/13451014/gdext_editor_plugin_test.zip)
if (p_custom_action_name == "select_current") {
		Node *scene = editor_data.get_edited_scene_root();
		if (!scene) {
			show_accept(TTR("There is no defined scene to run."), TTR("OK"));
			return;
		}
		pick_main_scene->hide();
		if (!FileAccess::exists(scene->get_scene_file_path())) {
			current_menu_option = FILE_SAVE_AND_RUN_MAIN_SCENE;
			_menu_option_confirm(FILE_SAVE_AS_SCENE, true);
			file->set_title(TTR("Save scene before running..."));
		} else {
			current_menu_option = SETTINGS_PICK_MAIN_SCENE;
			_dialog_action(scene->get_scene_file_path());
		}
	}
}
Ref<Texture2D> EditorNode::_get_class_or_script_icon(const String &p_class, const Ref<Script> &p_script, const String &p_fallback, bool p_fallback_script_to_theme) {