### Godot version

4.1.3

### System information

Linux

### Issue description

I'm trying to make an editor plugin on Rust:

```rust
#[derive(GodotClass)]
#[class(tool, editor_plugin, init, base=EditorPlugin)]
pub struct MyEditorPluginBase {}
```

But due to some limitations, I still have to use GDScript for some specific things.

So I tried to make a subclass of this Rust class:

```gdscript
@tool
class_name MyEditorPlugin
extends MyEditorPluginBase
```

This would work if `MyEditorPluginBase` was a GDScript class, but since it's a GDExtension class in my case, it doesn't work:

> Unable to load addon script from path: 'res://addons/my_addon/my_editor_plugin.gd' Base type is not EditorPlugin.

But it obviously **IS** EditorPlugin!

![godot-editorplugin-docs](https://github.com/godotengine/godot/assets/3236464/4665deeb-30f0-45cd-bfff-56101b9d4875)

![godot-editorplugin](https://github.com/godotengine/godot/assets/3236464/b1b6ecb4-de22-4abd-91a3-e180691f67ee)

If I understand correctly, this behavior is caused by this function, which checks some mysterious "instance base type" instead of real inheritance:

https://github.com/godotengine/godot/blob/fa4a65387ea41506ecc519fc61a06da110dce51c/editor/editor_node.cpp#L3456-L3458

https://github.com/godotengine/godot/blob/fa4a65387ea41506ecc519fc61a06da110dce51c/modules/gdscript/gdscript.cpp#L260-L263

Since the [documentation](https://docs.godotengine.org/en/stable/tutorials/plugins/editor/making_plugins.html#the-script-file) doesn't say that the script must be a **direct** subclass of EditorPlugin (and an indirect subclass works fine in GDScript), I interpret this behavior as a Godot bug.

### Steps to reproduce

See above

### Minimal reproduction project

[gdext_editor_plugin_test.zip](https://github.com/godotengine/godot/files/13451014/gdext_editor_plugin_test.zip)
}
			}
		}
		
		List<Node::GroupInfo> groups;
		p_node->get_groups(&groups);
		if (!modified_properties.is_empty() || !valid_connections_to.is_empty() || !valid_connections_from.is_empty() || !groups.is_empty()) {
			ModificationNodeEntry modification_node_entry;
			modification_node_entry.property_table = modified_properties;
			modification_node_entry.connections_to = valid_connections_to;
			modification_node_entry.connections_from = valid_connections_from;
			modification_node_entry.groups = groups;
			p_modification_table[p_root->get_path_to(p_node)] = modification_node_entry;
		}
	} else {
		AdditiveNodeEntry new_additive_node_entry;
		new_additive_node_entry.node = p_node;
		new_additive_node_entry.parent = p_root->get_path_to(p_node->get_parent());
		new_additive_node_entry.owner = p_node->get_owner();
		new_additive_node_entry.index = p_node->get_index();
		Node2D *node_2d = Object::cast_to<Node2D>(p_node);
		if (node_2d) {
			new_additive_node_entry.transform_2d = node_2d->get_relative_transform_to_parent(node_2d->get_parent());
		}
		Node3D *node_3d = Object::cast_to<Node3D>(p_node);
		if (node_3d) {
			new_additive_node_entry.transform_3d = node_3d->get_relative_transform(node_3d->get_parent());
		}
		
		HashMap<Node *, Node *> ownership_table;