### Godot version

4.1.3

### System information

Linux

### Issue description

I'm trying to make an editor plugin on Rust:

```rust
#[derive(GodotClass)]
#[class(tool, editor_plugin, init, base=EditorPlugin)]
pub struct MyEditorPluginBase {}
```

But due to some limitations, I still have to use GDScript for some specific things.

So I tried to make a subclass of this Rust class:

```gdscript
@tool
class_name MyEditorPlugin
extends MyEditorPluginBase
```

This would work if `MyEditorPluginBase` was a GDScript class, but since it's a GDExtension class in my case, it doesn't work:

> Unable to load addon script from path: 'res://addons/my_addon/my_editor_plugin.gd' Base type is not EditorPlugin.

But it obviously **IS** EditorPlugin!

![godot-editorplugin-docs](https://github.com/godotengine/godot/assets/3236464/4665deeb-30f0-45cd-bfff-56101b9d4875)

![godot-editorplugin](https://github.com/godotengine/godot/assets/3236464/b1b6ecb4-de22-4abd-91a3-e180691f67ee)

If I understand correctly, this behavior is caused by this function, which checks some mysterious "instance base type" instead of real inheritance:

https://github.com/godotengine/godot/blob/fa4a65387ea41506ecc519fc61a06da110dce51c/editor/editor_node.cpp#L3456-L3458

https://github.com/godotengine/godot/blob/fa4a65387ea41506ecc519fc61a06da110dce51c/modules/gdscript/gdscript.cpp#L260-L263

Since the [documentation](https://docs.godotengine.org/en/stable/tutorials/plugins/editor/making_plugins.html#the-script-file) doesn't say that the script must be a **direct** subclass of EditorPlugin (and an indirect subclass works fine in GDScript), I interpret this behavior as a Godot bug.

### Steps to reproduce

See above

### Minimal reproduction project

[gdext_editor_plugin_test.zip](https://github.com/godotengine/godot/files/13451014/gdext_editor_plugin_test.zip)
Ref<Environment> fallback = get_tree()->get_root()->get_world_3d()->get_fallback_environment();
	if (fallback.is_valid() && fallback->get_path().is_resource_file()) {
		HashMap<Ref<Resource>, bool> processed;
		_find_and_save_edited_subresources(fallback.ptr(), processed, 0);
		save_resource_in_path(fallback, fallback->get_path());
	}
}
void EditorNode::hide_unused_editors(const Object *p_editing_owner) {
	if (p_editing_owner) {
		const ObjectID id = p_editing_owner->get_instance_id();
		for (EditorPlugin *plugin : active_plugins[id]) {
			if (plugin->can_auto_hide()) {
				_plugin_over_edit(plugin, nullptr);
			} else {
				_plugin_over_self_own(plugin);
			}
		}
		active_plugins.erase(id);
	} else {
		
		
		List<ObjectID> to_remove;
		for (KeyValue<ObjectID, HashSet<EditorPlugin *>> &kv : active_plugins) {
			const Object *context = ObjectDB::get_instance(kv.key);
			if (context) {