content: /*************************************************************************
  *                                                                        *
  *  This file is part of the 20n/act project.                             *
  *  20n/act enables DNA prediction for synthetic biology/bioengineering.  *
  *  Copyright (C) 2017 20n Labs, Inc.                                     *
  *                                                                        *
  *  Please direct all queries to act@20n.com.                             *
  *                                                                        *
  *  This program is free software: you can redistribute it and/or modify  *
  *  it under the terms of the GNU General Public License as published by  *
  *  the Free Software Foundation, either version 3 of the License, or     *
  *  (at your option) any later version.                                   *
  *                                                                        *
  *  This program is distributed in the hope that it will be useful,       *
  *  but WITHOUT ANY WARRANTY; without even the implied warranty of        *
  *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the         *
  *  GNU General Public License for more details.                          *
  *                                                                        *
  *  You should have received a copy of the GNU General Public License     *
  *  along with this program.  If not, see <http://www.gnu.org/licenses/>. *
  *                                                                        *
  *************************************************************************/
  
  package act.installer.metacyc.references;
  
  import act.installer.metacyc.Resource;
  import act.installer.metacyc.BPElement;
  import java.util.Set;
  
  public class Publication extends BPElement {
    Integer year;
    String title;
    Set<String> source;
    String db, id;
    Set<String> authors;
  
    // an example (xml, but jsonified for readability, so please ignore the multikey) being:
    // { year: 2004,
    //   title: "A Bayesian method for identifying missing enzymes in predicted metabolic pathway databases."
    //   source: "BMC Bioinformatics 5;76"
    //   id: "15189570"
    //   db: "PubMed"
    //   author: "Green ML"
    //   author: "Karp PD"
    // }
  
    public Publication(BPElement basics, int year, String t, Set<String> src, String db, String id, Set<String> auth) {
      super(basics);
      this.year = year;
      this.title = t;
      this.source = src;
      this.db = db;
      this.id = id;
      this.authors = auth;
    }
  
    public String citation() {
      return "\""  + title + "\", " + source + ", " + year + ", " + authors;
    }
  
    public String dbid() {
      return db + "_" + id;
    }
  }
  
  