content: /*************************************************************************
  *                                                                        *
  *  This file is part of the 20n/act project.                             *
  *  20n/act enables DNA prediction for synthetic biology/bioengineering.  *
  *  Copyright (C) 2017 20n Labs, Inc.                                     *
  *                                                                        *
  *  Please direct all queries to act@20n.com.                             *
  *                                                                        *
  *  This program is free software: you can redistribute it and/or modify  *
  *  it under the terms of the GNU General Public License as published by  *
  *  the Free Software Foundation, either version 3 of the License, or     *
  *  (at your option) any later version.                                   *
  *                                                                        *
  *  This program is distributed in the hope that it will be useful,       *
  *  but WITHOUT ANY WARRANTY; without even the implied warranty of        *
  *  MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE.  See the         *
  *  GNU General Public License for more details.                          *
  *                                                                        *
  *  You should have received a copy of the GNU General Public License     *
  *  along with this program.  If not, see <http://www.gnu.org/licenses/>. *
  *                                                                        *
  *************************************************************************/
  
  package com.act.biointerpretation.l2expansion;
  
  import chemaxon.struc.Molecule;
  import com.act.biointerpretation.sars.Sar;
  import com.act.biointerpretation.sars.SerializableReactor;
  
  import java.util.ArrayList;
  import java.util.List;
  
  /**
   * This class bundles together the necessary components from which reaction predictions can be made.
   */
  public class PredictionSeed {
  
    private final String projectorName;
    private final List<Molecule> substrates;
    private final SerializableReactor ro;
    private final List<Sar> sars;
  
    public PredictionSeed(String projectorName, List<Molecule> substrates, SerializableReactor ro, List<Sar> sars) {
      this.projectorName = projectorName;
      this.substrates = substrates;
      this.ro = ro;
      this.sars = sars;
    }
  
    public String getProjectorName() {
      return projectorName;
    }
  
    public List<Molecule> getSubstrates() {
      return substrates;
    }
  
    public SerializableReactor getRo() {
      return ro;
    }
  
    public List<Sar> getSars() {
      return new ArrayList<Sar>(sars);
    }
  }
  