content: [project]
  name = "pairtools"
  dynamic = ['version',]
  
  dependencies = [
      'cython',
      'numpy>=1.10',
      'click>=6.6',
      'scipy>=1.7.0',
      'pandas>=1.3.4',
      'pysam>=0.15.0',
      'pyyaml',
      'bioframe>=0.3.3',
  ]
  requires-python = ">=3.9"
  
  description = "CLI tools to process mapped Hi-C data"
  authors = [
    {name = "Open2C", email = "open.chromosome.collective@gmail.com"},
  ]
  license = {text = "MIT License"}
  keywords = ["genomics", "bioinformatics", "Hi-C", "contact", "chromosome"]
  readme = "README.md"
  
  classifiers = [
    "Development Status :: 5 - Production/Stable",
    
    "Intended Audience :: Science/Research",
    "Topic :: Scientific/Engineering :: Bio-Informatics",
    "Operating System :: OS Independent",
  
    "License :: OSI Approved :: MIT License",
  
    "Programming Language :: Python",
    "Programming Language :: Python :: 3.9",
    "Programming Language :: Python :: 3.10",
    "Programming Language :: Python :: 3.11",
    "Programming Language :: Python :: 3.12",
  ]
  
  [project.optional-dependencies]
  test = [
    'pytest',
    'pytest-flake8',
    'pytest-cov',
  ]
  
  doc = [
    'sphinx-click',
    'ipython',
    'nbsphinx',
    'Sphinx>=7.0',
    'sphinx_rtd_theme',
    'docutils>0.16',
  ]
  
  
  
  [project.urls]
  Homepage = "https://github.com/open2c/pairtools"
  Documentation = "https://pairtools.readthedocs.io/en/latest/"
  Repository = "https://github.com/open2c/pairtools.git"
  Issues = "https://github.com/open2c/pairtools/issues"
  Changelog = "https://github.com/open2c/pairtools/blob/master/CHANGES.md"
  
  
  [project.scripts]
  pairtools = "pairtools.cli:cli"
  
  
  [build-system]
  requires = [
      "setuptools", 
      "cython", 
      "numpy", 
      "pysam"]
  build-backend = "setuptools.build_meta"
  