Tagged Questions

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0answers
9 views

What are guidelines for SmartPLS boostrapping case size?

In SmartPLS, bootstrapping is used to generate the t statistic from which statistical significance can be judged. The two main bootstrapping parameters are case and sample size. Increasing the sample ...
1answer
68 views

What's the best way to choose data for Crossvalidation on linear regression settings (PCA, PLS)

We are extracting features from EEG, which is a time dependent signal. We have signals of 10,000 datapoints over 64 channels, and we extract 10 features per timestamp per channel, so at the end we ...
0answers
31 views

Predict missing value(s) using existing measurement's data

I have a few measurements (6) with 13 different features (so I have more parameters than measurements). Let's say I would have a new measurement with a few missing values, considering I have existing ...
0answers
78 views

Understanding PLS output in R

I am running PLS regression in R using the 'pls' package. ...
0answers
84 views

Looking for example of multi-response PLS in R [closed]

Could anyone point me to an example of using R's PLS package to analyse data with multiple responses. I'm new to R and am having trouble setting up the data frame correctly. Specifically I'm ...
0answers
96 views

Minimum sample size for PLS SEM

I have a structural model with 6 latent variables and 26 related items (indicators). The maximum number of indicators for a latent variable is 5. How should I calculate the minimum required sample ...
1answer
43 views

How do you determine the effect of a simple predictor variable after a PLS analysis?

So, I am running PLS on a genetic dataset with phenotypic and genotypic information. I have about 1000 binary predictors (X), representing molecular markers, for each individual. My indicator ...
0answers
67 views

How do you predict the value of new instance, when the training data were normalized?

I estimated a Partial Least Squares model where the X matrix had normalized columns. Now I want to predict the value for a new instance (which is a frequency vector summing to one.) I assume that if I ...
0answers
112 views

Multilevel structure in Partial Least Squares Path Modelling [closed]

I have some complex survey data and need to fit a partial least squares path model (PLSPM) with the following structure M1, M2, M3, are latent variables from the item batteries Batt1, Batt2, Batt3. ...
1answer
83 views

Under what conditions can a PLS regression model be expressed by single linear equation?

I am confused by two, yet inconsistent for me, facts: Since the PLS regression is expressed by matrices of scores and loadings as $$X=TP^T+E\\Y=UQ^T+F$$ how it can be translated into linear equation ...
3answers
181 views

Dimension reduction technique [closed]

As i know, PCA and PLS are two famous methods of dimension reduction Could you please name for other (neural network is it useful)?
1answer
215 views

How to fit data with nonlinear partial least squares in R?

I am looking for a way to do nonlinear partial least squares in R or matlab. I thought kernel pls was a way to do it but it is not directly related to nonlinear pls. Do I have to calculate my own ...
1answer
257 views

Combining principal component analysis and partial least squares

I know PCA and PLS are considered as alternative method to each other. But I am thinking about a kind of combination of the two in case of lots of predictors with little variability. In that case, ...
1answer
185 views

how to find a linear combination of predictors maximizing correlation between its score and dependent variable in R

Please correct me if I am wrong as I am not good at R. I think I can find a linear combination maximizing correlation between predictors and dependent variables by running partial least squares ...
0answers
84 views

PLS regression is not working on weighted data

I was running PLS regression on the data which is weighted and gives the following error message: ...
1answer
2k views

PLS in R with the pls package

I am very new in PLS and I try to understand the output of the R function plsr(). Let us simulate data and run the PLS: ...
1answer
483 views

PCA, LDA, CCA, and PLS

How are PCA, LDA, CCA, and PLS related? They all seem "spectral" and linear algebraic and very well understood (say 50+ years of theory built around them). They are used for very different things PCA: ...
1answer
334 views

Measuring predictive accuracy for multiple dependent variables

In machine learning and in statistics there exist plenty of measures which estimate the performance of a predictive model. For example, classification accuracy, area under ROC curve ... for ...
0answers
194 views

What, if any, dissimilarity is preserved in partial least squares (PLS)?

When we perform a principal components analysis (PCA) on a multivariate data set we are interested in finding orthogonal components that explain maximal variance in the data set. We can form a biplot ...
2answers
998 views

How to compute the confidence intervals on regression coefficients in PLS?

The underlying model of PLS is that a given $n \times m$ matrix $X$ and $n$ vector $y$ are related by $$X = T P' + E,$$ $$y = T q' + f,$$ where $T$ is a latent $n \times k$ matrix, and \$E, ...
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