skeletal-muscle-atlas / skeletal_muscle_10x_unstructured_metadata.json
jkh's picture
Upload skeletal_muscle_10x_unstructured_metadata.json with huggingface_hub
c74119f verified
{
"pca": {
"params": {
"zero_center": true,
"use_highly_variable": false,
"mask_var": null
},
"variance": [
500.15606689453125,
95.81372833251953,
56.14661407470703,
44.05858612060547,
30.42363166809082,
29.41731834411621,
23.957942962646484,
21.469289779663086,
17.22434425354004,
16.31106185913086,
15.383774757385254,
13.98925495147705,
11.368206977844238,
11.140381813049316,
8.66443920135498,
7.809399604797363,
7.280561447143555,
6.760623931884766,
6.011730194091797,
5.768130779266357,
5.252693176269531,
5.076221466064453,
4.690951347351074,
4.240753173828125,
4.154295921325684,
3.7451422214508057,
3.649273157119751,
3.472527027130127,
3.4057862758636475,
3.336733341217041,
3.000300168991089,
2.921261787414551,
2.8743479251861572,
2.7476911544799805,
2.6784579753875732,
2.5585875511169434,
2.3797852993011475,
2.3379404544830322,
2.266301155090332,
2.2269577980041504,
2.147202253341675,
2.0274746417999268,
1.9892851114273071,
1.9460257291793823,
1.8801389932632446,
1.8427921533584595,
1.8356956243515015,
1.7619755268096924,
1.7141212224960327,
1.6623191833496094
],
"variance_ratio": [
0.1531055783815088,
0.02933007767819912,
0.017187354889937004,
0.013487020866407434,
0.009313148497689378,
0.009005100282945558,
0.00733390027017444,
0.006572084688615166,
0.005272640609069256,
0.004993070613867833,
0.004709213559168921,
0.00428232928127998,
0.003479985587919652,
0.003410244749140334,
0.002652320071835916,
0.0023905791060952137,
0.002228693492069718,
0.0020695325036002373,
0.0018402844419241986,
0.0017657148590101703,
0.00160793136391753,
0.001553910619099453,
0.0014359734225660296,
0.001298160735075297,
0.0012716948206821126,
0.0011464464871864656,
0.001117099470295445,
0.0010629947212982464,
0.001042564335663385,
0.0010214261546079135,
0.0009184387096285803,
0.0008942438274176123,
0.0008798827619702081,
0.0008411111476312931,
0.0008199177909377536,
0.00078322358316228,
0.0007284894231826784,
0.0007156800630804585,
0.0006937501554089029,
0.0006817065397439943,
0.0006572921227191268,
0.0006206416321489477,
0.0006089512208496859,
0.0005957088487624711,
0.0005755398905555977,
0.0005641074399610326,
0.0005619350816712339,
0.0005393682092096827,
0.0005247192597618044,
0.0005088618470664044
]
},
"neighbors": {
"connectivities_key": "connectivities",
"distances_key": "distances",
"params": {
"n_neighbors": 15,
"method": "umap",
"random_state": 0,
"metric": "euclidean",
"n_pcs": 40
}
},
"tsne": {
"params": {
"perplexity": 30,
"early_exaggeration": 12,
"learning_rate": 1000,
"n_jobs": 8,
"metric": "euclidean"
}
}
}