animation changed to animate

.ipynb_checkpoints/app-checkpoint.py

@@ -427,7 +427,7 @@ def solve_ODE_for_volume(Rm, Ra, Emax, Emin, Vd, Tc, start_v, t):
     
     return volumes
 
-def pvloop_simulator(Rm, Ra, Emax, Emin, Vd, Tc, start_v, animation=True):
+def pvloop_simulator(Rm, Ra, Emax, Emin, Vd, Tc, start_v, animate=True):
     
 
     # Define initial parameters
@@ -461,7 +461,7 @@ def pvloop_simulator(Rm, Ra, Emax, Emin, Vd, Tc, start_v, animation=True):
     plt.xlim((0,250))
     start = (N-2)*60000
     end = (N-2)*60000+50000
-    if animation:
+    if animate:
         line = ax.plot(volumes[start:(start+1)], pressures[start:(start+1)], lw=1, color='b')
         point = ax.scatter(volumes[start:(start+1)], pressures[start:(start+1)], c="b", s=5)
     else:
@@ -483,14 +483,14 @@ def pvloop_simulator(Rm, Ra, Emax, Emin, Vd, Tc, start_v, animation=True):
         y = pressures[start:end]
         ax.plot(x, y, lw=1, c='b')
         
-    if animation:
+    if animate:
         anim = animation.FuncAnimation(fig, partial(update), frames=43, interval=1)
         anim.save("prediction.mp4")
         
     return plt, Rm, Ra, Emax, Emin, Vd, Tc, start_v
 
 def pvloop_simulator_plot_only(Rm, Ra, Emax, Emin, Vd, Tc, start_v):
-    plot,_,_,_,_,_,_,_ =pvloop_simulator(Rm, Ra, Emax, Emin, Vd, Tc, start_v, animation=False)
+    plot,_,_,_,_,_,_,_ =pvloop_simulator(Rm, Ra, Emax, Emin, Vd, Tc, start_v, animate=False)
     plt.title('Simulated PI-SSL LV Pressure Volume Loop', fontsize=16)
     return plot
 
@@ -506,7 +506,7 @@ def generate_example():
         val_seq = val_data[0]
     
         val_tensor = torch.tensor(val_seq, dtype=torch.float32) 
-        n=random.randint(0, 29)
+        n=random.randint(0, 27)
         results = model(val_tensor)[n]
 
         filename = val_data[1][0][n]

app.py

@@ -427,7 +427,7 @@ def solve_ODE_for_volume(Rm, Ra, Emax, Emin, Vd, Tc, start_v, t):
     
     return volumes
 
-def pvloop_simulator(Rm, Ra, Emax, Emin, Vd, Tc, start_v, animation=True):
+def pvloop_simulator(Rm, Ra, Emax, Emin, Vd, Tc, start_v, animate=True):
     
 
     # Define initial parameters
@@ -461,7 +461,7 @@ def pvloop_simulator(Rm, Ra, Emax, Emin, Vd, Tc, start_v, animation=True):
     plt.xlim((0,250))
     start = (N-2)*60000
     end = (N-2)*60000+50000
-    if animation:
+    if animate:
         line = ax.plot(volumes[start:(start+1)], pressures[start:(start+1)], lw=1, color='b')
         point = ax.scatter(volumes[start:(start+1)], pressures[start:(start+1)], c="b", s=5)
     else:
@@ -483,14 +483,14 @@ def pvloop_simulator(Rm, Ra, Emax, Emin, Vd, Tc, start_v, animation=True):
         y = pressures[start:end]
         ax.plot(x, y, lw=1, c='b')
         
-    if animation:
+    if animate:
         anim = animation.FuncAnimation(fig, partial(update), frames=43, interval=1)
         anim.save("prediction.mp4")
         
     return plt, Rm, Ra, Emax, Emin, Vd, Tc, start_v
 
 def pvloop_simulator_plot_only(Rm, Ra, Emax, Emin, Vd, Tc, start_v):
-    plot,_,_,_,_,_,_,_ =pvloop_simulator(Rm, Ra, Emax, Emin, Vd, Tc, start_v, animation=False)
+    plot,_,_,_,_,_,_,_ =pvloop_simulator(Rm, Ra, Emax, Emin, Vd, Tc, start_v, animate=False)
     plt.title('Simulated PI-SSL LV Pressure Volume Loop', fontsize=16)
     return plot
 
@@ -506,7 +506,7 @@ def generate_example():
         val_seq = val_data[0]
     
         val_tensor = torch.tensor(val_seq, dtype=torch.float32) 
-        n=random.randint(0, 29)
+        n=random.randint(0, 27)
         results = model(val_tensor)[n]
 
         filename = val_data[1][0][n]