| # Python dependencies | |
| numpy>=1.21.0 | |
| scipy>=1.7.0 | |
| biopython>=1.79 | |
| requests>=2.26.0 | |
| pyyaml>=6.0 | |
| transformers>=4.30.0 | |
| huggingface-hub>=0.16.0 | |
| torch>=2.0.0 | |
| # Web GUI dependencies | |
| fastapi>=0.100.0 | |
| uvicorn[standard]>=0.23.0 | |
| websockets>=11.0 | |
| python-multipart>=0.0.6 | |
| # Task queue (optional) | |
| celery>=5.3.0 | |
| redis>=4.6.0 | |
| # Database | |
| pymongo>=4.4.0 | |
| # CLI interface | |
| click>=8.1.0 | |
| rich>=13.0.0 | |
| # System and utilities | |
| psutil>=5.9.0 | |
| aiohttp>=3.8.0 | |
| pydantic>=2.0.0 | |
| tqdm>=4.65.0 | |
| pandas>=2.0.0 | |
| matplotlib>=3.7.0 | |
| seaborn>=0.12.0 | |