Synthyra/homodimer_benchmark

Dataset of proteins that homodimerize (1) and randomly selected proteins from StringDB (0). Data splits are random, but the balance is roughly 90:10. The main assumption is that most proteins do not dimerize with themselves.

Homodimers are selected from here via the 80% identity clustering.

@misc {SynthyraHomodimerBenchmark,
    author       = { Hallee, L. and Bichara, D. and Gleghorn, J, P. },
    title        = { Synthyra Homodimer Benchmark },
    year         = 2024,
    url          = { https://huggingface.co/datasets/Synthyra/homodimer_benchmark },
    doi          = { 10.57967/hf/3798 },
    publisher    = { Hugging Face }
}